Information for 4-GTGCATAGGT (Motif 24)

A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGCATAGGT--
TAGGGCAAAGGTCA
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGCATAGGT
--CCATATGT
 A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGCATAGGT------
TCGCGAAGGTTGTACT
 A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGCATAGGT--
TGGGGCAAAGGTCA
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGCATAGGT--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GTGCATAGGT-
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGCATAGGT
ATGMATATDC
 A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTGCATAGGT-
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGCATAGGT-
-ACCATATGTT
 A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGCATAGGT-
-ANCATATGTT
 A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T