Information for 3-ATTGTAGCGT (Motif 23)

C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.987e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATTGTAGCGT
CCATTGTTNY--
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTAGCGT--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ATTGTAGCGT-
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTGTAGCGT
CTCATTGTC----
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTGTAGCGT-
AATGTATCAAT
 C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTGTAGCGT
ATTGTT----
 C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTAGCGT--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTAGCGT
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTGTAGCGT
ATTGTTA---
 C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATTGTAGCGT-
AAAATTGTTATGAA
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C T G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A