Information for 11-GGCCTATTTTTCT (Motif 13)

A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G T A C G T A A C G T C G T A A C T G A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.078e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCCTATTTTTCT---
-TTCTATTTTTAGNNN
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCCTATTTTTCT-
--KCTATTTTTRGH
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGCCTATTTTTCT
---CTATTTTTGG
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCTATTTTTCT-
--GCTATTTTTAGC
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTATTTTTCT---
ANNTCTATTGTTCNNNA
 A C G T A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCTATTTTTCT-
--GCTATTTTTGGM
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCTATTTTTCT----
AATCAATTGTTCCGCTA
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCTATTTTTCT
AGGCCTAG------
 A C G T A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCTATTTTTCT----
CNNNTATTGTTCNNNNN
 A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCCTATTTTTCT-----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T