Information for 3-GACCTGABTA (Motif 22)

C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A
Reverse Opposite:
A C G T C G T A T A G C C A G T A G T C C G T A A C T G A C T G A G C T G T A C
p-value:1e-7
log p-value:-1.640e+01
Information Content per bp:1.746
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif5.94%
Number of Background Sequences with motif386.0
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets45.7 +/- 26.4bp
Average Position of motif in Background51.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GACCTGABTA-
-AGCTCATTAT
 C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGABTA-----
NNNACCTCATTATCNTN
 A C G T A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGABTA-----
GCAACCTCATTATNNNN
 A C G T A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGABTA--
TTGACCTANTTATN
 A C G T A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGABTA
TGACCTARTT-
 A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACCTGABTA
RYHYACCTGB---
 A C G T A C G T A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GACCTGABTA-
---CTAATTAA
 C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGABTA
NCACCTGTN--
 A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACCTGABTA----
GCGAACTAATTAATGC
 A C G T A C G T C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GACCTGABTA
--NCTAATTA
 C A T G C T G A T G A C A G T C C G A T C T A G G T C A A T C G A C G T C G T A
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A