Information for 7-RMKGGSCMTSGKRGMA (Motif 10)

C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T T G A C A G T C G T A C A G T C A T G C C G T A A C T G A T C G A T C G A G T C A G T C G T C A A C G T A G T C
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.781
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.4 +/- 29.0bp
Average Position of motif in Background51.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RMKGGSCMTSGKRGMA
---TGCCCTGAGGGCA
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RMKGGSCMTSGKRGMA
---TGCCCTGAGGGCA
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RMKGGSCMTSGKRGMA
---TGCCCTNAGGGCA
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RMKGGSCMTSGKRGMA-
-----SCCTSAGGSCAW
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:RMKGGSCMTSGKRGMA-
-----GCCTCAGGGCAT
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RMKGGSCMTSGKRGMA
AGTGGGCGTGGC----
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RMKGGSCMTSGKRGMA
NANAAGGGCGTGGTC---
 A C G T A C G T C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RMKGGSCMTSGKRGMA
-GGGGCCCAAGGGGG-
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-RMKGGSCMTSGKRGMA
AAGGGGGCGTGGCC---
 A C G T C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RMKGGSCMTSGKRGMA
-GGGGGCGTGGN----
 C T A G G T C A A C G T A C T G A C T G A T G C A T G C G T A C A C G T A T C G A C T G A C T G C T A G A C T G G T C A C G T A
A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T A C G T