Information for 4-ACHTGGGCACAGT (Motif 6)

C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
Reverse Opposite:
G T C A T G A C A C G T C T A G A C G T C T A G A G T C A T G C G T A C C G T A C A T G C T A G C G A T
p-value:1e-5
log p-value:-1.347e+01
Information Content per bp:1.725
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif288.1
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets46.5 +/- 30.3bp
Average Position of motif in Background50.4 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACHTGGGCACAGT-
NNNNTTGGGCACNNCN
 A C G T A C G T C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACHTGGGCACAGT
-NGTGGGCAT---
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACHTGGGCACAGT
-NNTTGGCANN--
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACHTGGGCACAGT
--NTTGATACATT
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACHTGGGCACAGT--
NTNTATGTGCACATNNN
 A C G T A C G T C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACHTGGGCACAGT
WDNCTGGGCA----
 A C G T C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACHTGGGCACAGT
--CCAGGAACAG-
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACHTGGGCACAGT---
CAGATGTGCACATACGT
 A C G T C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0096.1_Zfp187_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACHTGGGCACAGT-
TTATTAGTACATAN
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACHTGGGCACAGT
--ATTTGCATA--
 C G T A A G T C G A T C A C G T A C T G A T C G C T A G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T