Information for 17-GTGTTACCCCAGCGCC (Motif 38)

A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A T G C A C G T C T A G A C T G C T A G A C T G A G C T C T G A C G T A A G T C C G T A A G T C
p-value:1e-2
log p-value:-6.461e+00
Information Content per bp:1.909
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 31.0bp
Average Position of motif in Background62.5 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANANGTGATACCCCATT---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANNNATGATACCCCATC---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANANNTGATACCCNATN---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTTACCCCAGCGCC
ANANNTGATACCCTATN---
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTGTTACCCCAGCGCC
--ATCACCCCAT----
 A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTACCCCAGCGCC
GCTGTTACCCT------
 A C G T A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGTTACCCCAGCGCC
--ATCACCCCAC----
 A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGTTACCCCAGCGCC
--ATCACCCCAT----
 A C T G A C G T C T A G C G A T A G C T C T G A A G T C A G T C A G T C A G T C C G T A A T C G G T A C A C T G A G T C A G T C
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T