Information for 16-GAGAGAGAGAGAGAVA (Motif 37)

A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
Reverse Opposite:
A C G T A G T C C G A T A G T C C G A T A G T C C G A T A G T C A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C
p-value:1e-2
log p-value:-6.684e+00
Information Content per bp:1.770
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background58.9 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGAGAGAGAGAGAVA
-AGAAAGTGAAAGTGA
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGAVA
--GAAAGTGAAAGT--
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGAGAGAGAVA--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGAGAGAGAGAGAVA
--GAAAGTGAAAGT--
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGAGAGAGAGAGAVA
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGAVA
-GGAAANTGAAACTNA
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGAVA
--GAAACTGAAACT--
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGAGAGAGAGAGAVA
--GRAASTGAAAST--
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGAGAGAGAVA---
-WNAGTCADAVTGAAACTN
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGAGAGAGAGAGAVA
-AAAAAGAGGAAGTA-
 A T C G C G T A C T A G C T G A T C A G C G T A C T A G C G T A A C T G C G T A C T A G C G T A C T A G C G T A T A C G C G T A
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T