Information for 4-ATCAAACATA (Motif 15)

C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.070e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACATA
CCATCAATCAAA
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAACATA-
AAACAAACATTC
 A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATCAAACATA
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCAAACATA
ATTAAA----
 C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATCAAACATA-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACATA
TCATCAATCA--
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATCAAACATA--
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATCAAACATA-----
---AAACATATGTTT
 C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATCAAACATA--
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAACATA--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A