Information for 1-CACACACACTAACCAC (Motif 1)

G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A T C G C A G T A C G T C G T A A C T G A C G T C T A G A C G T A T C G A C G T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.843
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.3 +/- 26.4bp
Average Position of motif in Background86.6 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0177.1_Sox7_2/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CACACACACTAACCAC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CACACACACTAACCAC
AGCGGCACACACGCAA---
 A C G T A C G T A C G T G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CACACACACTAACCAC
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CACACACACTAACCAC-----
-CCCCAAACCACCCCCCCCCA
 G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CACACACACTAACCAC----
--------NWAACCACADNN
 G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CACACACACTAACCAC---
---------AAACCACAGC
 G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CACACACACTAACCAC--
--------NAAACCACAG
 G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACACACACTAACCAC
GCCACACCCA--------
 A C G T A C G T G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CACACACACTAACCAC---
---------AAACCACANN
 G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CACACACACTAACCAC
GGCCACACCCAN-------
 A C G T A C G T A C G T G T A C C G T A A G T C C G T A A T G C C G T A A G T C C G T A G T A C C G A T T G C A G T C A A T G C A G T C C G T A A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T