Information for 3-TGAATGGGGCTGGGGT (Motif 7)

A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
Reverse Opposite:
C G T A A G T C A G T C A G T C G T A C C G T A A C T G A G T C T G A C G T A C G T A C C G T A A C G T A G C T A G T C C G T A
p-value:1e-10
log p-value:-2.395e+01
Information Content per bp:1.809
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 28.5bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGAATGGGGCTGGGGT
NTTNTATGAATGTGNNC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGGGGCTGGGGT
NNTNTCATGAATGT---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGAATGGGGCTGGGGT--
--NATNGGGNGGGGANAN
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAATGGGGCTGGGGT
---GTGGGGGAGGGG-
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGAATGGGGCTGGGGT
TGGGTGTGGC------
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TGAATGGGGCTGGGGT
------WDNCTGGGCA
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGAATGGGGCTGGGGT--
-NAAGGGGGCGTGGCTTN
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T A C G T A C G T
A C G T C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGAATGGGGCTGGGGT
ATGAATWATTCATGA--
 A C G T A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGAATGGGGCTGGGGT
TGAATTATGCAT----
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:TGAATGGGGCTGGGGT--
------TGTCAGGGGGCG
 A C G T A C T G C T G A C G T A A C G T A C T G A C T G A C T G C T A G A G T C C G A T A C T G A C T G A C T G C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G