Information for 2-TGTTTGCTCA (Motif 3)

A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
Reverse Opposite:
C A G T A C T G C T G A C T A G A G T C G C T A G C T A C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.19%
Number of Background Sequences with motif119.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets58.2 +/- 23.7bp
Average Position of motif in Background47.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTCA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTCA
TRTTTACTTW
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCA
TGTTTACTTT
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGTTTGCTCA-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCA
TGTTTACTTT
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTTTGCTCA
CNTGTTTACATA
 A C G T A C G T A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTCA--
TGTTTACTTAGG
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGCTCA--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCA
TGTTTAC---
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTCA
TGTTTAC---
 A C G T A C T G A C G T C G A T C G A T A C T G A G T C G A C T A G T C G T C A
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T