Information for 10-GAAAMCTCGGCCG (Motif 9)

A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
Reverse Opposite:
T G A C A C T G A C T G A T G C A G T C T A C G G T C A C T A G A C T G A C G T A C G T A G C T G T A C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.736
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.1 +/- 20.3bp
Average Position of motif in Background44.2 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAAMCTCGGCCG
-AAATCACAGCA-
 A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAMCTCGGCCG
ACTGAAACCA------
 A C G T A C G T A C G T A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAAMCTCGGCCG
-AAATCACTGC--
 A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAAMCTCGGCCG
--WDNCTGGGCA-
 A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAMCTCGGCCG
NNGGCGACACCTCNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAAMCTCGGCCG
GWAAYHTGABMC-
 A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAAAMCTCGGCCG---
GAGCCCTTGTCCCTAA
 A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------GAAAMCTCGGCCG
CGTATCGAAACCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAMCTCGGCCG
NNNCTGATATCTCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAAAMCTCGGCCG
TGACACCT------
 A C G T A C T G T C G A T G C A G T C A T G A C A G T C A C G T A T G C T A C G A T C G A G T C T G A C A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T