Information for 3-AGTGGGAAGCTGAGCA (Motif 6)

G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
Reverse Opposite:
C G A T A C T G A T G C A C G T A G T C C G T A T C A G T A G C C A G T A G C T A T G C A G T C A G T C C G T A A G T C C G A T
p-value:1e-13
log p-value:-3.075e+01
Information Content per bp:1.662
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.7 +/- 20.9bp
Average Position of motif in Background49.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTGGGAAGCTGAGCA
CSTGGGAAAD------
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGTGGGAAGCTGAGCA
----GWAAYHTGABMC
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTGGGAAGCTGAGCA
----CGCAGCTGCG--
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGTGGGAAGCTGAGCA
TGCGGAGTGGGACTGG-----
 A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGAAGCTGAGCA
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGTGGGAAGCTGAGCA
------WDNCTGGGCA
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGTGGGAAGCTGAGCA
----GWAAYHTGAKMC
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGTGGGAAGCTGAGCA
GGCGGGAARN------
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGAAGCTGAGCA
TTAAGAGGAAGTTA----
 A C G T A C G T G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGTGGGAAGCTGAGCA
----NGAAGC------
 G C T A T A C G G A C T C T A G C T A G A T C G T C G A G C T A A C T G A G T C C G A T C T A G T G C A A T C G A G T C G C T A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T