Information for 4-CGGCGTCAGCAGG (Motif 4)

G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A C G T A T C G C G T A A G T C A C T G A T G C A G T C A C T G
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 28.3bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGCGTCAGCAGG
-TGAGTCAGCA--
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGGCGTCAGCAGG--
----GTCAGCANNTN
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGGCGTCAGCAGG--
---NGTCAGCANTTT
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGGCGTCAGCAGG---
----CACAGCAGGGGG
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGCGTCAGCAGG
CAACGTCCGCGG-
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGGCGTCAGCAGG
---DCTCAGCAGG
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGTCAGCAGG---
NCTANGTCAGCAAATTT
 A C G T G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGGCGTCAGCAGG-----
---DCHCAGCAGGRGGCC
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGCGTCAGCAGG--
CTGAGTCAGCAATTT
 G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCGTCAGCAGG----
GCTGAGTCAGCAATTTTT
 A C G T G T A C A C T G A T C G A G T C C T A G A C G T A T G C C G T A A C T G A G T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T