Information for 15-RGAGCGGCGYGGA (Motif 27)

C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
Reverse Opposite:
A G C T A G T C A G T C C T A G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A G T C A G T C
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.910
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.3 +/- 29.8bp
Average Position of motif in Background49.4 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RGAGCGGCGYGGA---
NAGANTGGCGGGGNGNA
 A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RGAGCGGCGYGGA
-----GGCGCGCT
 C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGAGCGGCGYGGA---
NNAGGGGCGGGGTNNA
 C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----RGAGCGGCGYGGA
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

SP3/MA0746.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RGAGCGGCGYGGA
--GGGGGCGTGGN
 C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---RGAGCGGCGYGGA--
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RGAGCGGCGYGGA-
AAGGGGGCGTGGCC
 C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RGAGCGGCGYGGA
GGGGGCGGGGCC--
 A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGAGCGGCGYGGA
CGGAGC--------
 A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGAGCGGCGYGGA
NNGCNCTGCGCGGC
 A C G T C T A G A C T G C G T A C T A G A G T C A C T G A C T G A G T C A C T G A G T C A C T G T C A G C T G A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C