Information for 13-TATAAAVWWACMT (Motif 21)

A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
Reverse Opposite:
C G T A C A G T A T C G G A C T C G A T C G T A A G C T C A G T C G A T C G A T C T G A A C G T T G C A
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.668
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif174.1
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets32.5 +/- 26.5bp
Average Position of motif in Background48.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TATAAAVWWACMT
NNTATANATATACN-
 A C G T A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATAAAVWWACMT-
GTATAAAAGGCGGGG
 A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATAAAVWWACMT-
GTATAAAAGGCGGGG
 A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATAAAVWWACMT---
-ATGAATATTCATGAG
 A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATAAAVWWACMT
GCAATAAAA------
 A C G T A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATAAAVWWACMT-
AYATGYATATGCATR
 A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TATAAAVWWACMT--
---AAACAAACATTC
 A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TATAAAVWWACMT
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TATAAAVWWACMT
ACGGCCATAAAATTAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TATAAAVWWACMT
TCTTTATATATAAATA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A C G T A G T C A T C G A C G A T C G T A C G T A A T G C G T C A G A C T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T A C G T A C G T