Information for 10-CCCTGAACCCCAC (Motif 15)

A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A C T G A C T G A G C T A C G T G T A C C T G A T A C G C T A G A C T G
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.827
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.9 +/- 26.7bp
Average Position of motif in Background47.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGAACCCCAC
CCCCCTTGGGCCCC--
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGAACCCCAC
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTGAACCCCAC
--ATAATCCC---
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTGAACCCCAC--
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCTGAACCCCAC
---TGGGGCCCAC
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTGAACCCCAC----
-TATCGACCCCCCACAG
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCTGAACCCCAC------
---CTATCCCCGCCCTATT
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGAACCCCAC
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCTGAACCCCAC------
----AAGCCCCCCAAAAAT
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCTGAACCCCAC------
---TCGACCCCGCCCCTAT
 A G T C A G T C A G T C A G C T A C T G C G T A T C G A A G T C A G T C A G T C G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T