Information for 8-MATTTTTTRYAGA (Motif 10)

G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C T A G A G C T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 22.1bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:MATTTTTTRYAGA-
TTTTTTTTCNNGTN
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MATTTTTTRYAGA--
GNATTTTTTTTTTGANC
 A C G T A C G T G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MATTTTTTRYAGA-
CCATTGTATGCAAAT
 A C G T G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MATTTTTTRYAGA
TATTGTTTATT--
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MATTTTTTRYAGA--
ANATTTTTGCAANTN
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:MATTTTTTRYAGA
-TTTGTTTACTTA
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MATTTTTTRYAGA
-ATTGTTA-----
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--MATTTTTTRYAGA--
NNNTTTGTTTACATTTN
 A C G T A C G T G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MATTTTTTRYAGA-
--NTGTTTAYATWW
 G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----MATTTTTTRYAGA
CCTTGCAATTTTTNN---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T C G A T A C G T A C G T A C G T C T G A A G C T C G T A A C T G C G T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T