Information for 3-GAGTTAGTGC (Motif 32)

A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.394e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GAGTTAGTGC---
-RGTTAGTGCCCY
 A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGTTAGTGC--
--TTAAGTGCTT
 A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGTTAGTGC
AGAGGAAGTG-
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTAGTGC----
NNGCGTGTGTGCNGCN
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTAGTGC-
NTGATTTATGGCC
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTAGTGC-
TGATTTATGGCC
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGTTAGTGC
--TTAAGTGC
 A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PH0039.1_Mnx1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGTTAGTGC--
GTACTAATTAGTGGCG
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

HOXA5/MA0158.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTTAGTGC
-AATTAGTG-
 A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTAGTGC-
TGATTTATGGCC
 A C G T A C T G C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C