Information for 11-SMCTRSKTTWCMA (Motif 17)

A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G A T C G T A C G T A G T C A A T C G A G C T C G T A A C T G A C G T A T G C
p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 23.1bp
Average Position of motif in Background37.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:SMCTRSKTTWCMA--
-----ATTTTCCATT
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:SMCTRSKTTWCMA
------TTTTCCA
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SMCTRSKTTWCMA--
-----ATTTTCCATT
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SMCTRSKTTWCMA--
-----ATTTTCCATT
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SMCTRSKTTWCMA--
-----ATTTTCCATT
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:SMCTRSKTTWCMA-
----CGGTTTCAAA
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SMCTRSKTTWCMA--
ANNNCTAGTTAACNGNN
 A C G T A C G T A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SMCTRSKTTWCMA--
-----HTTTCCCASG
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:SMCTRSKTTWCMA
---TTGTTTAC--
 A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A
A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----SMCTRSKTTWCMA-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G T C A C G T C T G A A T G C A C G T A C G T A C G T C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G