Information for 24-TGGGTGTAAAATATTG (Motif 47)

A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C A G T C A G T C C G T A
p-value:1e-3
log p-value:-7.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGGGTGTAAAATATTG
GAAAAGGTGTGAAAATT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG
AAGGTGTGAAA-----
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG-----
-------CTAATATTGCTAAA
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG-----
-------CTAATATTGCTAAA
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGTAAAATATTG
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG
-AGGTGTGAAA-----
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG
TAGGTGTGAAG-----
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG
AAGGTGTGAAAAT---
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGGTGTAAAATATTG
CAAGGTCGTAAAATCTT-
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGGTGTAAAATATTG
-GGTCGTAAAAA----
 A C G T A C T G A C T G A C T G A C G T A C T G A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T