Information for 6-GCATCTACCCTCT (Motif 9)

A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
Reverse Opposite:
C G T A A C T G C G T A C T A G A C T G A C T G C G A T C G T A A C T G C G T A A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 33.2bp
Average Position of motif in Background35.5 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCATCTACCCTCT-------
GCCTCCTCCMTCWGACTGKS
 A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCATCTACCCTCT
GCTGTTACCCT--
 A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GCATCTACCCTCT
CCNNACCATCTGGCCTN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCATCTACCCTCT
SNGCACCTGCHS---
 A C G T A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCATCTACCCTCT-----
-NTCNTCCCCTATNNGNN
 A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCATCTACCCTCT
CGCAGCTGCG----
 A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCATCTACCCTCT---
CCGTCTTCCCCCTCAC
 A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTACCCTCT
NVCAGCTGBBNN--
 A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----GCATCTACCCTCT
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTACCCTCT
GCCAGCTGBTNB--
 A C G T A C T G A G T C C G T A A C G T G T A C A C G T C G T A A G T C A G T C A G T C A C G T G T A C A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T