Information for 3-GGGGAGCTGBHGCTCT (Motif 2)

A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G G T A C C G T A T C A G A G T C C G T A A C T G A T G C C G A T A G T C A G T C A G T C A G T C
p-value:1e-17
log p-value:-4.116e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 22.1bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGCTGBHGCTCT
TGGGGA-----------
 A C G T A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAGCTGBHGCTCT
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTGBHGCTCT
-CGGAGC---------
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGGAGCTGBHGCTCT
-AGCAGCTGCTNN---
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGGAGCTGBHGCTCT
-TGCAGCTGTCCCT--
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTGBHGCTCT
-AGCAGCTGCT-----
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGGGAGCTGBHGCTCT
-----GCTGTTACCCT
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGGGAGCTGBHGCTCT
-----GCTGTG-----
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTGBHGCTCT
-AGATGCTRCTRCCHT
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GGGGAGCTGBHGCTCT
--NCAGCTGCTG----
 A C T G C T A G A C T G A C T G C G T A T A C G A G T C A C G T A C T G A G T C G C A T A C T G G T A C A C G T A G T C A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T