Information for 13-AGCGATGGGG (Motif 25)

C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C C G T A A C G T A G T C A C T G A G T C A C G T
p-value:1e-2
log p-value:-5.655e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 23.7bp
Average Position of motif in Background66.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCGATGGGG--
--GGAGGGGGAA
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGCGATGGGG-
-----TGGGGA
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCGATGGGG---
--TAATGGCGGNC
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCGATGGGG
CAGCC------
 A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGCGATGGGG---
---TATGCGGGTA
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCGATGGGG------
NNNNATGCGGGTNNNN
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCGATGGGG
GAACAATGG--
 A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCGATGGGG
GAACAATGGN-
 A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGCGATGGGG--------
---GGGGGGGGGGGGGGA
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCGATGGGG----
----GTGGGGGGGG
 C G T A A C T G A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G