Information for 16-TATGAATATBCAT (Motif 19)

C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T C T A G T C G A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T C G T A
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 26.6bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TATGAATATBCAT---
-ATGAATATTCATGAG
 C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TATGAATATBCAT-
AYATGYATATGCATR
 A C G T C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TATGAATATBCAT
---GAATATTCAT
 C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TATGAATATBCAT
---GHATATKCAT
 C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TATGAATATBCAT
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATGAATATBCAT
NNTATANATATACN-
 A C G T A C G T C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TATGAATATBCAT
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TATGAATATBCAT--
--TTCATTTGCATAT
 C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATGAATATBCAT
ATTTGCATAT----
 A C G T C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATGAATATBCAT
TATGCAAAT----
 C G A T G T C A A C G T C T A G G T C A C T G A A C G T C G T A A G C T A C G T A G T C C G T A A C G T
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T