Information for 9-CTGTCCTTAG (Motif 17)

A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A C G T A C T A G T C A G C G T A G T A C C G T A C T A G
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.860
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.8 +/- 24.1bp
Average Position of motif in Background57.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTAG
CTGACCTTTG
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTAG
-TGACCTYA-
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTAG
GTGACCTT--
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTAG
BNTGDCCTTG-
 A C G T A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTAG
CTGTTCCTGG
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTAG-
-TGACCTTGAV
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGTCCTTAG
NTGACCTTGA
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTAG-
-TGACCTTGAN
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTAG
ATGACCTTGA
 A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTAG----
GCTGACCTTGAACTN
 A C G T A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T