Information for 12-TGGGCTTTTTGGCTCT (Motif 16)

A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
Reverse Opposite:
C G T A C A T G C T G A A C T G A G T C G T A C C G T A T C G A G T C A G C T A C T G A A C T G A T G C G T A C G T A C G T C A
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.761
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 24.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
-------NTTGGCANN
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGGGCTTTTTGGCTCT
--------TTGGCA--
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCT-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
----CCGATTGGCT--
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
AGGNCANNGTGACCT-
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGGGCTTTTTGGCTCT
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT
-GGTCANNGTGACCTN
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT-
-----TGATTGGCTANN
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCT-
--------TTGACTTTT
 A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCTTTTTGGCTCT
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G C T C A G T A C G T A C G T A C G T A C T G C T A G A G T C A G C T G A T C G C A T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T