Information for 9-CCGTCCTCMCGGWGGA (Motif 13)

G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A G T C G T A C A C T G C A G T A C T G T C G A C T A G A C T G C G T A A T G C A T C G A C T G
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.727
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 26.0bp
Average Position of motif in Background49.1 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCGTCCTCMCGGWGGA-
---CCCCCCCGGGGGNN
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCGTCCTCMCGGWGGA-
--NCCCCCCCGGGGGGN
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A A C G T
A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCGTCCTCMCGGWGGA--
------TCCCNNGGGACN
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCGTCCTCMCGGWGGA--
---CCCCCCCGGGGGGGT
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CCGTCCTCMCGGWGGA-
-----------GTGGAT
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCGTCCTCMCGGWGGA
CNGTCCTCCC------
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCGTCCTCMCGGWGGA
TCCGCCCCCGCATT---
 A C G T G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCTCMCGGWGGA
CCCCCGCCCCCGCC-----
 A C G T A C G T A C G T G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGTCCTCMCGGWGGA
-ACCACTCTCGGTCAC
 G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCTCMCGGWGGA
GCCCCGCCCCC-------
 A C G T A C G T G T A C A T G C A T C G A C G T A G T C A G T C A C G T G T A C G T C A A G T C C A T G C T A G G C A T C T A G A C T G C G T A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T