Information for 7-CTATTAATCT (Motif 12)

A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
Reverse Opposite:
T C G A A C T G T C G A G A C T C A G T T G C A C G T A A C G T C G T A T A C G
p-value:1e-10
log p-value:-2.387e+01
Information Content per bp:1.673
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif223.8
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets46.8 +/- 27.0bp
Average Position of motif in Background47.0 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTATTAATCT
NTAATTAATAT
 A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTATTAATCT
CAATTAA---
 A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTATTAATCT
CTAATTAA---
 A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTATTAATCT
GCAATTAG---
 A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTATTAATCT-----
GNNNATTAATCCCTNCN
 A C G T A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTATTAATCT
--ATTAAA--
 A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTATTAATCT
ACTAATTAAA--
 A C G T A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTATTAATCT
NNCAATTANN--
 A C G T A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTATTAATCT
RGCCATYAATCA
 A C G T A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

BSX/MA0876.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTATTAATCT
CCAATTAA---
 A C G T A T G C G C A T T G C A C G A T A C G T G T C A C T G A A G C T T G A C A G C T
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T