Information for 4-AGTTASAGGAGAGACC (Motif 6)

C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
Reverse Opposite:
A T C G T C A G A G C T A G T C C G A T A G T C A C G T A G T C G T A C C G A T T A C G A G C T G C T A G T C A A G T C G A C T
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.752
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 20.6bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTTASAGGAGAGACC
-GWAAYHTGAKMC---
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC-
-------GGAAANCCCC
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC
-GWAAYHTGABMC---
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC-
-------GGAAATTCCC
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC
---NACAGGAAAT---
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC-
-------GGAAATCCCC
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGTTASAGGAGAGACC
---NACAGGAAAT---
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGTTASAGGAGAGACC
----AGGTGHCAGACA
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGTTASAGGAGAGACC-
----AGGTGNCAGACAG
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGTTASAGGAGAGACC
----AGAGGAA-----
 C G T A A C T G A C G T C G A T T C G A A T G C C G T A C A T G A C T G C G T A T A C G C G T A C T A G C T G A A G T C A T G C
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T