Information for 5-ATTGTATTTC (Motif 9)

C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
Reverse Opposite:
C A T G G T C A C T G A C G T A G A C T C T G A T A G C C G T A C T G A C G A T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.835
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif224.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets48.6 +/- 27.9bp
Average Position of motif in Background49.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGTATTTC
ATTGTTTAN-
 C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATTGTATTTC--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.68
Offset:-9
Orientation:reverse strand
Alignment:---------ATTGTATTTC---
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTATTTC---
TNAATTTTATTACCTN
 A C G T A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTTC
CCATTGTTNY--
 A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTGTATTTC
ATTGTTA---
 C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTTC
CCATTGTTTT--
 A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTATTTC--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTTC
CCATTGTTYB--
 A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTGTATTTC---
CCATTGTATGCAAAT
 A C G T A C G T C G T A G A C T A C G T A T C G A G C T C T G A A C G T A G C T C A G T G T A C A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T