Information for 3-CTCAGAGGCTCTG (Motif 7)

A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
Reverse Opposite:
G T A C T C G A A T C G C G T A T A C G A G T C A G T C A G C T A G T C C G A T C T A G G T C A A T C G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.795
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.5 +/- 27.9bp
Average Position of motif in Background51.9 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCAGAGGCTCTG
---AGAGGAAGTG
 A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAGGCTCTG
GTCCCCAGGGGA----
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAGGCTCTG-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAGGCTCTG
ATGCCCTGAGGC----
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTCAGAGGCTCTG
NNVVCAGCTGBN---
 A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGAGGCTCTG
WTGSCCTSAGGS----
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTCAGAGGCTCTG
--CAGCTGNT---
 A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTCAGAGGCTCTG----------
---YCAGGCWCAGTACCAGGCTC
 A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAGGCTCTG
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTCAGAGGCTCTG
AGCCTCAGGCA---
 A C G T A T G C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C G C A T A T G C A C G T A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T