Information for 6-GGCTTCACTGTGC (Motif 9)

A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCTTCACTGTGC
-GCTTCC------
 A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTTCACTGTGC
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCACTGTGC
AGGVNCCTTTGT--
 A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTCACTGTGC
TGGTTTCAGT----
 A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCTTCACTGTGC---
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCTTCACTGTGC----
-------CTGTTCCTGG
 A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGCTTCACTGTGC
------GCTGTG-
 A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCTTCACTGTGC
---CTCATTGTC-
 A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGCTTCACTGTGC
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGCTTCACTGTGC-
----WDNCTGGGCA
 A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A