Information for 4-AACGTACAAC (Motif 7)

C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AACGTACAAC--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AACGTACAAC--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

GMEB2/MA0862.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACGTACAAC
TTACGTAA---
 A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AACGTACAAC--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AACGTACAAC
GCACGTACCC-
 A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AACGTACAAC
BGCACGTA----
 A C G T A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACGTACAAC
AGTCGTAAAAA
 A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AACGTACAAC-----
ATGTCACAACAACAC
 C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AACGTACAAC
GGTCGTAAAAA
 A C G T C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AACGTACAAC--
--RNAACAATGG
 C G T A C G T A A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G