Information for 11-GMRMWWWTGMATTTTY (Motif 22)

A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
Reverse Opposite:
C T A G G T C A C G T A C G T A C G T A A C G T A C T G A G T C C G T A G C A T C G A T C G A T A C G T A G C T A C T G A T G C
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.801
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY---
----CCTTGCAATTTTTNN
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GMRMWWWTGMATTTTY
------ATGAATATTC
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY-
-NNNTATTGAATTGNNN
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GMRMWWWTGMATTTTY
------ATGMATATDC
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GMRMWWWTGMATTTTY
-TTCATTTGCATAT--
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY
----ATTTGCATAT--
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY--
---CTCATGAATATTCAT
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY-
---NTTATTGATTTTTT
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY-
---ATTATCGATTTTTT
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GMRMWWWTGMATTTTY
------TTGACTTTT-
 A T C G G T A C C T G A G T C A G C T A C G T A C G T A C G A T A C T G G T A C C G T A A C G T C G A T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T