Information for 18-TTGATCTCAAATT (Motif 20)

A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TTGATCTCAAATT
-----CACTAATT
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCTCAAATT
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTGATCTCAAATT
AATCCCTTTGATCTATC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTGATCTCAAATT
ATTTCCTTTGATCTATA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TTGATCTCAAATT
NNTTCCTTTGATCTANA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TTGATCTCAAATT
NNTTCCTTTGATCTNNA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTGATCTCAAATT
AACCCTTTGATCTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGATCTCAAATT
ATTGATTYND----
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATCTCAAATT
TNCCTTTGATGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGATCTCAAATT
CCTTTGATCTTT----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T