Information for 8-AGTCTGATCCCAA (Motif 11)

C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTCTGATCCCAA
---ATAATCCC--
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGATCCCAA
TWGTCTGV------
 A C G T C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTCTGATCCCAA
-TKCTGTTCCA--
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTCTGATCCCAA---
AGGCTAATCCCCAANG
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTCTGATCCCAA
---TTAATCCC--
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGTCTGATCCCAA
--CTTAATCCC--
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTCTGATCCCAA
--CCTAATCCGC-
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTCTGATCCCAA
--GCTAATCC---
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGTCTGATCCCAA
---YTAATCCY--
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGTCTGATCCCAA
--GCTAATCCCC-
 C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A C G T A
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T