Information for 6-CTTCAATGCTTTG (Motif 9)

A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C T G C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAATGCTTTG
NANTTCATTGAATTA
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTTCAATGCTTTG-
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTTCAATGCTTTG-------
----ANTCCTTTGTCTNNNN
 A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAATGCTTTG-
NNNTTAATTGGTTTTT
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTCAATGCTTTG-----
-NNCTTTGTTTTGNTNNN
 A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTCAATGCTTTG
ACATCAAAGG----
 A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTTCAATGCTTTG
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTTCAATGCTTTG
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTTCAATGCTTTG
ACWTCAAAGG----
 A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTTCAATGCTTTG
GCTTCC--------
 A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T