Information for 5-CGTCACCCGG (Motif 9)

A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
Reverse Opposite:
A G T C T G A C C A T G A C T G A T C G C A G T T C A G G T C A A T G C T A C G
p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.832
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif135.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets57.6 +/- 31.6bp
Average Position of motif in Background50.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGTCACCCGG----
NNNNTGACCCGGCGCG
 A C G T A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACCCGG
ACGTCATC---
 A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTCACCCGG
TACGTCAT----
 A C G T A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTCACCCGG----
NNCNTGACCCCGCTCT
 A C G T A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACCCGG
ACGTCA-----
 A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTCACCCGG-
-GTCACATGAY
 A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTCACCCGG
GGTCACGTGG
 A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTCACCCGG-
GGTCACGTGGC
 A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G A C G T
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGTCACCCGG-----
----ACCCGGATGTA
 A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CGTCACCCGG
NTTATTCGTCATNC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T C G A C G T A G T C G T C A A T G C G T A C G A T C A C T G A C T G
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T