Information for 2-ATCAGAGGAA (Motif 7)

C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T T G A C A G T C A C G T A G T C A C G T A C T G C G T A A C G T
p-value:1e-12
log p-value:-2.950e+01
Information Content per bp:1.894
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif63.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.4 +/- 25.6bp
Average Position of motif in Background53.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ATCAGAGGAA
---AGAGGAA
 C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ATCAGAGGAA--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAGAGGAA--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATCAGAGGAA--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAGAGGAA--
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCAGAGGAA
ACATCAAAGGNA
 A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATCAGAGGAA---
---AGAGGAAGTG
 C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATCAGAGGAA
AAAGATCAAAGGAA
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATCAGAGGAA--
--AACAGGAAGT
 C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCAGAGGAA-
AAAGATCAAAGGGTT
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C G T A A C T G C G T A C T A G A C T G C G T A C G T A A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T