Information for 3-CCGAGGGGTCGAG (Motif 4)

G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G
Reverse Opposite:
A T G C A C G T A T G C A T C G C G T A A T G C A G T C A T G C A G T C A G C T A G T C C T A G A C T G
p-value:1e-13
log p-value:-3.197e+01
Information Content per bp:1.785
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets64.3 +/- 20.1bp
Average Position of motif in Background54.2 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGGGGTCGAG-
NTNTGGGGGGTCNNNA
 A C G T A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGAGGGGTCGAG---
CTCCAGGGGTCAATTGA
 A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGAGGGGTCGAG---
GGCGAGGGGTCAAGGGC
 A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGGGGTCGAG
TCCCCTGGGGAC---
 A C G T A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGGGGTCGAG---
NNNAAGGGGGCGGGNNN
 A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGAGGGGTCGAG-
---GGGGGCGGGGC
 G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGAGGGGTCGAG
-GGAGGGGGAA--
 G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGAGGGGTCGAG-
--RGKGGGCGGAGC
 G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGAGGGGTCGAG---
--AGGGGGCGGGGCTG
 G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGGGGTCGAG
CTTCGCGGGGGGTC---
 A C G T A C G T A C G T A C G T G T A C A G T C C T A G C T G A C T A G A T C G A C T G A T C G G C A T T A G C A T C G C G T A A T C G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T