Information for 11-AAAAGAGAGAGAG (Motif 22)

G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
Reverse Opposite:
A T G C A G C T A G T C C G A T A G T C A G C T A G T C A G C T G A T C A G C T A G C T A C G T C A G T
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.769
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif81.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets42.4 +/- 19.6bp
Average Position of motif in Background47.7 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAAGAGAGAGAG-
AGAAAGTGAAAGTGA
 A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAAGAGAGAGAG-
--GAAAGTGAAAGT
 G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAAGAGAGAGAG----
-AAACAGACAAAGGAAT
 G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G A C G T A C G T A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAAGAGAGAGAG
GAAAGTGAAAGT-
 G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAGAGAGAGAG---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAAGAGAGAGAG
AAAAAGCGGAAGTA
 A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAAGAGAGAGAG
AAAAAGAGGAAGTA
 A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGAGAGAGAG
BAGTCATANTGAAAG--
 A C G T A C G T A C G T A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAAGAGAGAGAG
GRAASTGAAAST-
 G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AAAAGAGAGAGAG
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A C T G A C T G A C A T G C T G A A C T G C T G A T C A G C G T A C T A G C T G A T A C G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T