Information for 4-WKTCTCKCTCTCT (Motif 7)

C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G C G T A T G A C C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.901
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.5 +/- 31.5bp
Average Position of motif in Background40.4 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---WKTCTCKCTCTCT
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WKTCTCKCTCTCT
AGTATTCTCGGTTGC-
 A C G T A C G T A C G T C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WKTCTCKCTCTCT--
-GTCACGCTCNCTGA
 C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WKTCTCKCTCTCT
TGTCTGDCACCT-
 C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WKTCTCKCTCTCT
AGTTTCAGTTTC-
 C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---WKTCTCKCTCTCT
ACCACTCTCGGTCAC-
 A C G T A C G T A C G T C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WKTCTCKCTCTCT
CTGTCTGTCACCT-
 A C G T C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--WKTCTCKCTCTCT
TCACTTTCACTTTCN
 A C G T A C G T C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WKTCTCKCTCTCT-
ANTTTCGCTTTCGN
 C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WKTCTCKCTCTCT
ASTTTCASTTYC-
 C G A T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T