Information for 5-CRGAGGAKTGGCG (Motif 8)

A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A G T C C G T A G T A C C A G T A G T C A G T C A C G T A G T C A G T C A C T G
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 15.6bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP3/MA0746.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CRGAGGAKTGGCG
-GGGGGCGTGGN-
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T

KLF16/MA0741.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CRGAGGAKTGGCG
-GGGGGCGTGGC-
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CRGAGGAKTGGCG--
CAAAGGCGTGGCCAG
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CRGAGGAKTGGCG-------
---NAGANTGGCGGGGNGNA
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CRGAGGAKTGGCG
-GGGGGCGGGGC-
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CRGAGGAKTGGCG
AAGAGGATTAG--
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CRGAGGAKTGGCG--
GCGGAGGTGTCGCCTC
 A C G T A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CRGAGGAKTGGCG
AGTGGGCGTGGC-
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CRGAGGAKTGGCG
--DGGGYGKGGC-
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CRGAGGAKTGGCG
---AGGCCTNG--
 A G T C C T A G A C T G C G T A A C T G A C T G G T C A A C T G C G A T C T A G A C T G A T G C A C T G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T