Information for 2-GCGGGGCRGCCGAGGC (Motif 3)

A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
Reverse Opposite:
A C T G A T G C A T G C A G C T A T G C C A T G A C T G A G T C A G C T A C T G A G T C A G T C A G T C A G T C A T C G A G T C
p-value:1e-13
log p-value:-3.126e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 17.9bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGGGGCRGCCGAGGC--
---GGTCANYTGAGGWCA
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGGGGCRGCCGAGGC-
--AAGGKGRCGCAGGCA
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGGCRGCCGAGGC
AGAGRRACAGCWGAC--
 A C G T A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGCRGCCGAGGC
GGGGGCGGGGCC--------
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCGGGGCRGCCGAGGC
TNNGGGCAG-------
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGCRGCCGAGGC
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GCGGGGCRGCCGAGGC-
------AGCCTCAGGCA
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCGGGGCRGCCGAGGC---
-----GGGGCCGAGGCCTG
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GCGGGGCRGCCGAGGC-
------CGCCTCAGGCA
 A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGCRGCCGAGGC
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A C T G A T G C T A C G A C T G A C T G C T A G A G T C C T G A C T A G A G T C G T A C A T C G C T G A A T C G A T C G A G T C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T