Information for 1-AGGGGCGGGGCHR (Motif 2)

T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
Reverse Opposite:
G A T C C T G A A C T G A G T C G A T C T G A C G T A C C T A G A G T C A G T C A T G C G T A C A C G T
p-value:1e-15
log p-value:-3.511e+01
Information Content per bp:1.717
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.91%
Number of Background Sequences with motif1132.3
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets57.3 +/- 25.5bp
Average Position of motif in Background48.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:AGGGGCGGGGCHR
GGGGGCGGGGCC-
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCGGGGCHR
AGGGGGCGGGGCTG
 A C G T T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:AGGGGCGGGGCHR
GGGGGCGGGGC--
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:AGGGGCGGGGCHR
-GGGGNGGGGC--
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGCGGGGCHR-
NNAGGGGCGGGGTNNA
 A C G T A C G T T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCGGGGCHR
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGCGGGGCHR
NNVDGGGYGGGGCYN
 A C G T A C G T T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AGGGGCGGGGCHR
-TGGGTGGGGC--
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AGGGGCGGGGCHR
MKGGGYGTGGCC-
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AGGGGCGGGGCHR
-DGGGYGKGGC--
 T G C A C A T G T A C G A C T G A C T G G A T C A C T G A C T G C T A G T C A G T G A C G A C T C T A G
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T