Information for 4-GRCGTGAGKAGRCSKM (Motif 15)

A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
Reverse Opposite:
A C G T G T A C A T C G A C T G A G T C A G T C A C G T G T A C A G T C A G C T A G T C G T C A A G T C A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 14.3bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GRCGTGAGKAGRCSKM
GGACGTGC---------
 A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GRCGTGAGKAGRCSKM
GTGGGGTGAT--------
 A C G T A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GRCGTGAGKAGRCSKM
ATGGGGTGAT--------
 A C G T A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GRCGTGAGKAGRCSKM
RTACGTGC---------
 A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GRCGTGAGKAGRCSKM
TACGTGCV--------
 A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GRCGTGAGKAGRCSKM
GGGTACGTGC---------
 A C G T A C G T A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GRCGTGAGKAGRCSKM
--ANTGCGGGGGCGGN
 A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GRCGTGAGKAGRCSKM
TGCGTG----------
 A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GRCGTGAGKAGRCSKM
GGGCGGGAAGG------
 A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GRCGTGAGKAGRCSKM
AGGTGTGA---------
 A C G T A C T G T C A G A G T C A C T G A C G T A C T G C T G A A C T G A C T G C G T A A C T G C T A G A G T C A T G C A C T G G T C A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T