Information for 19-CTGTTGTATC (Motif 41)

A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.662e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background37.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTGTTGTATC---
--AATGTATCAAT
 A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTGTATC
CCACCTGTTGCAT-
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTTGTATC
GCTGTGGTTT-
 A C G T A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTGTTGTATC
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGTTGTATC
CTGTGGTTTN
 A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTGTATC--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTTGTATC--
--ATTGCATCAK
 A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTTGTATC
GTCTGTGGTTT-
 A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTTGTATC
CCATTGTTNY
 A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGTTGTATC--
--ATTGCATCAT
 A G T C A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T