Information for 19-CCMCSSGKGGSMYSSK (Motif 40)

T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
Reverse Opposite:
G T A C A T G C A T C G C T A G A C T G A T G C A G T C T G A C T G A C A T G C A T G C A T C G A C T G A C T G A C T G A T C G
p-value:1e-3
log p-value:-7.950e+00
Information Content per bp:1.755
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background48.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCMCSSGKGGSMYSSK
CACCCCCGGGGGGG----
 A C G T A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCMCSSGKGGSMYSSK
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCMCSSGKGGSMYSSK
CCCCCCCGGGGGGGT---
 A C G T A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCMCSSGKGGSMYSSK
TGCCCNNAGGGCA----
 A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCMCSSGKGGSMYSSK
TGCCCTGAGGGCA----
 A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCMCSSGKGGSMYSSK
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCMCSSGKGGSMYSSK
CCCCCTTGGGCCCC--
 T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCMCSSGKGGSMYSSK---
GCCASCAGGGGGCGCYVNNG
 A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCMCSSGKGGSMYSSK
TGCCCTGAGGGCA----
 A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCMCSSGKGGSMYSSK
AAATTCCCCCCGGAAGT----
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C G T A C A G T C A T G C A T C G A T C G A C T G A C T G C T A G A T C G T G A C A G T C A T G C A T C G A C T G
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T A C G T A C G T A C G T